| | | Round 1 | | Round 1, Pick 1 - Detroit Tigers: SP C.c. Sabathia | | Round 1, Pick 2 - Baltimore Orioles: SP Mark Prior | | Round 1, Pick 3 - Montreal Expos: SP Josh Beckett | | Round 1, Pick 4 - San Diego Padres: SP Danny Haren | | Round 1, Pick 5 - Arizona Diamondbacks: 1B Albert Pujols | | Round 1, Pick 6 - Chicago Cubs: SP Daisuke Matsuzaka | | Round 1, Pick 7 - Colorado Rockies: LF Matt Holliday | | Round 1, Pick 8 - Florida Marlins: SP Joe Blanton | | Round 1, Pick 9 - Oakland Athletics: 1B Mark Teixeira | | Round 1, Pick 10 - New York Mets: SP Brett Myers | | Round 1, Pick 11 - Chicago White Sox: CF Shane Victorino | | Round 1, Pick 12 - Tampa Bay Devil Rays: SP Noah Lowry | | Round 1, Pick 13 - St. Louis Cardinals: 3B Hank Blalock | | Round 1, Pick 14 - Toronto Blue Jays: 3B Maicer Izturis | | Round 1, Pick 15 - Kansas City Royals: LF Jonny Gomes | | Round 1, Pick 16 - Anaheim Angels: SP Luis Martinez | | Round 1, Pick 17 - New York Yankees: SS Felipe Lopez | | Round 1, Pick 18 - New York Yankees: RF Austin Kearns | | Round 1, Pick 19 - Cleveland Indians: LF Nyjer Morgan | | Round 1, Pick 20 - Chicago Cubs: 3B Chad Tracy | | Round 1, Pick 21 - Pittsburgh Pirates: LF Nick Swisher | | Round 1, Pick 22 - San Francisco Giants: CF Rajai Davis | | Round 1, Pick 23 - Minnesota Twins: 2B Dan Uggla | | Round 1, Pick 24 - Philadelphia Phillies: SS Brendan Harris | | Round 1, Pick 25 - Seattle Mariners: CF Cody Ross | | Round 1, Pick 26 - Cincinnati Reds: 1B Chris Shelton | | Round 1, Pick 27 - Milwaukee Brewers: LF Skip Schumaker | | Round 1, Pick 28 - Texas Rangers: LF Scott Hairston | | Round 1, Pick 29 - Houston Astros: MR Jonathan Papelbon | | Round 1, Pick 30 - New York Mets: RF Nelson r Cruz |
| Supplemental Round 1 | | Round 1 (Supplemental Round), Pick 1 - Detroit Tigers: 3B Jose a Bautista | | Round 1 (Supplemental Round), Pick 2 - Chicago Cubs: 3B Sean Burroughs | | Round 1 (Supplemental Round), Pick 3 - New York Mets: 2B Mike Fontenot | | Round 1 (Supplemental Round), Pick 4 - St. Louis Cardinals: 1B Mike Jacobs | | Round 1 (Supplemental Round), Pick 5 - St. Louis Cardinals: C Kelly Shoppach | | Round 1 (Supplemental Round), Pick 6 - St. Louis Cardinals: SS Bobby Crosby | | Round 1 (Supplemental Round), Pick 7 - Toronto Blue Jays: LF Fred Lewis Jr. | | Round 1 (Supplemental Round), Pick 8 - Kansas City Royals: 2B Chris Burke | | Round 1 (Supplemental Round), Pick 9 - Kansas City Royals: 3B Dallas McPherson | | Round 1 (Supplemental Round), Pick 10 - Atlanta Braves: 2B Hector Luna | | Round 1 (Supplemental Round), Pick 11 - New York Yankees: 3B Corey Myers | | Round 1 (Supplemental Round), Pick 12 - Seattle Mariners: SS Cesar Izturis | | Round 1 (Supplemental Round), Pick 13 - Houston Astros: C John Buck | | Round 1 (Supplemental Round), Pick 14 - Baltimore Orioles: SP Chien-ming Wang | | Round 1 (Supplemental Round), Pick 15 - New York Mets: MR Neal Cotts | | Round 1 (Supplemental Round), Pick 16 - Kansas City Royals: SS Russ Adams |
| Round 2 | | Round 2, Pick 1 - St. Louis Cardinals: 3B Jack Hannahan | | Round 2, Pick 2 - Baltimore Orioles: MR Matt Lindstrom | | Round 2, Pick 3 - Montreal Expos: MR Pat Neshek | | Round 2, Pick 4 - San Diego Padres: LF Ryan Langerhans | | Round 2, Pick 5 - Toronto Blue Jays: CF Chris Duffy | | Round 2, Pick 6 - Houston Astros: LF Ryan Roberts | | Round 2, Pick 7 - Seattle Mariners: MR C.j. Wilson | | Round 2, Pick 8 - Florida Marlins: MR Ryan Madson | | Round 2, Pick 9 - Oakland Athletics: 3B Vinny Rottino | | Round 2, Pick 10 - St. Louis Cardinals: 3B Jeff Keppinger | | Round 2, Pick 11 - Chicago White Sox: LF Justin Christian | | Round 2, Pick 12 - Atlanta Braves: MR Todd Coffey | | Round 2, Pick 13 - Detroit Tigers: MR Jesse Carlson | | Round 2, Pick 14 - Kansas City Royals: 1B Mark Saccomanno | | Round 2, Pick 15 - Kansas City Royals: CF Laynce Nix | | Round 2, Pick 16 - Anaheim Angels: SP Kevin Correia | | Round 2, Pick 17 - Atlanta Braves: MR Justin Hampson | | Round 2, Pick 18 - New York Yankees: CF Luis Terrero | | Round 2, Pick 19 - Cleveland Indians: MR Chad Orvella | | Round 2, Pick 20 - Boston Red Sox: 2B Freddie Bynum | | Round 2, Pick 21 - Pittsburgh Pirates: 1B Walter Young | | Round 2, Pick 22 - San Francisco Giants: MR Brandon Medders | | Round 2, Pick 23 - Minnesota Twins: MR Gary Majewski | | Round 2, Pick 24 - Philadelphia Phillies: SS Don Kelly | | Round 2, Pick 25 - Seattle Mariners: 1B Micah Hoffpauir | | Round 2, Pick 26 - Cincinnati Reds: MR Matt Belisle | | Round 2, Pick 27 - Milwaukee Brewers: SP Carlos e Hernandez | | Round 2, Pick 28 - Texas Rangers: LF Todd Linden | | Round 2, Pick 29 - Houston Astros: LF Jason Botts | | Round 2, Pick 30 - Los Angeles Dodgers: SP Rich Hill |
| Round 3 | | Round 3, Pick 1 - Detroit Tigers: MR Jeff Bennett | | Round 3, Pick 2 - Baltimore Orioles: CF Adam Stern | | Round 3, Pick 3 - Montreal Expos: MR Ruddy Lugo | | Round 3, Pick 4 - San Diego Padres: 2B Antonio Perez | | Round 3, Pick 5 - Arizona Diamondbacks: MR Brian Wolfe | | Round 3, Pick 6 - Chicago Cubs: CF Jason Repko | | Round 3, Pick 7 - Colorado Rockies: 3B Tommy Watkins | | Round 3, Pick 8 - Florida Marlins: MR Lance Cormier | | Round 3, Pick 9 - Oakland Athletics: SP Gustavo Chacin | | Round 3, Pick 10 - New York Mets: SP Mike Wood | | Round 3, Pick 11 - Chicago White Sox: LF Jeff Salazar | | Round 3, Pick 12 - St. Louis Cardinals: 3B John Hattig | | Round 3, Pick 13 - St. Louis Cardinals: 2B Luis Maza | | Round 3, Pick 14 - Toronto Blue Jays: LF Mel Stocker | | Round 3, Pick 15 - Kansas City Royals: 1B Brad Eldred | | Round 3, Pick 16 - Anaheim Angels: MR Scott Munter | | Round 3, Pick 17 - Atlanta Braves: MR Steve Schmoll | | Round 3, Pick 18 - New York Yankees: LF Chris Denorfia | | Round 3, Pick 19 - Cleveland Indians: SP Mike Thompson Jr. | | Round 3, Pick 20 - Boston Red Sox: 2B Mike Rouse | | Round 3, Pick 21 - Pittsburgh Pirates: SP Kazuhito Tadano | | Round 3, Pick 22 - San Francisco Giants: SP Miguel Asencio | | Round 3, Pick 23 - Minnesota Twins: MR Brad Salmon | | Round 3, Pick 24 - Philadelphia Phillies: 2B Doug Bernier | | Round 3, Pick 25 - Seattle Mariners: LF Ray Sadler | | Round 3, Pick 26 - Cincinnati Reds: MR Juan Dominguez | | Round 3, Pick 27 - Milwaukee Brewers: MR Yoel Hernandez | | Round 3, Pick 28 - Texas Rangers: SP Jack Cassel | | Round 3, Pick 29 - Houston Astros: SP Jason Davis | | Round 3, Pick 30 - Los Angeles Dodgers: SP Chris Waters |
| Round 4 | | Round 4, Pick 1 - Detroit Tigers: SP Cha seung Baek | | Round 4, Pick 2 - Baltimore Orioles: SP Nick Neugebauer | | Round 4, Pick 3 - Montreal Expos: SP Jesse Foppert | | Round 4, Pick 4 - San Diego Padres: SP Mike O'Connor | | Round 4, Pick 5 - Arizona Diamondbacks: MR Jose Veras | | Round 4, Pick 6 - Chicago Cubs: MR Roy Corcoran | | Round 4, Pick 7 - Colorado Rockies: SP John Koronka | | Round 4, Pick 8 - Florida Marlins: MR Doug Slaten | | Round 4, Pick 9 - Oakland Athletics: SP Bobby Bradley | | Round 4, Pick 10 - New York Mets: SP Dewon Brazelton | | Round 4, Pick 11 - Chicago White Sox: MR Jung Bong | | Round 4, Pick 12 - Tampa Bay Devil Rays: SP Felix Diaz | | Round 4, Pick 13 - St. Louis Cardinals: MR Yhency Brazoban | | Round 4, Pick 14 - Toronto Blue Jays: SP John Van benschoten | | Round 4, Pick 15 - Kansas City Royals: SP Josh Girdley | | Round 4, Pick 16 - Anaheim Angels: MR Marcus McBeth | | Round 4, Pick 17 - Atlanta Braves: MR Royce Ring | | Round 4, Pick 18 - New York Yankees: MR Mark McLemore Jr. | | Round 4, Pick 19 - Cleveland Indians: MR Brad Hennessey | | Round 4, Pick 20 - Boston Red Sox: MR Craig Breslow | | Round 4, Pick 21 - Pittsburgh Pirates: MR Troy Cate | | Round 4, Pick 22 - San Francisco Giants: MR Josh Hall | | Round 4, Pick 23 - Minnesota Twins: MR Kurt Birkins | | Round 4, Pick 24 - Philadelphia Phillies: MR Ehren Wassermann | | Round 4, Pick 25 - Seattle Mariners: MR Ryan O'Malley | | Round 4, Pick 26 - Cincinnati Reds: MR Dale Thayer | | Round 4, Pick 27 - Milwaukee Brewers: MR Denny Bautista | | Round 4, Pick 28 - Texas Rangers: MR Jon Coutlangus | | Round 4, Pick 29 - Houston Astros: MR Phil Stockman | | Round 4, Pick 30 - Los Angeles Dodgers: MR Francisco Rosario |
| Round 5 | | Round 5, Pick 1 - Detroit Tigers: MR Bryan Bullington | | Round 5, Pick 2 - Baltimore Orioles: MR Franklyn German | | Round 5, Pick 3 - Montreal Expos: MR Neal Musser | | Round 5, Pick 4 - San Diego Padres: MR Levale Speigner | | Round 5, Pick 5 - Arizona Diamondbacks: MR Matt Roney | | Round 5, Pick 6 - Chicago Cubs: MR T.j. Beam | | Round 5, Pick 7 - Colorado Rockies: MR Chris Demaria | | Round 5, Pick 8 - Florida Marlins: MR Jonah Bayliss | | Round 5, Pick 9 - Oakland Athletics: MR Edwin Moreno | | Round 5, Pick 10 - New York Mets: MR Matt DeSalvo | | Round 5, Pick 11 - Chicago White Sox: MR Clint Nageotte | | Round 5, Pick 12 - Tampa Bay Devil Rays: MR Dewon Day | | Round 5, Pick 13 - St. Louis Cardinals: MR Pedro Liriano | | Round 5, Pick 14 - Toronto Blue Jays: MR Kelvin Jimenez | | Round 5, Pick 15 - Kansas City Royals: MR Jermaine Van buren | | Round 5, Pick 16 - Anaheim Angels: MR Jeff Ridgway | | Round 5, Pick 17 - Atlanta Braves: MR Mike Gosling | | Round 5, Pick 18 - New York Yankees: MR Victor Marte | | Round 5, Pick 19 - Cleveland Indians: MR Ryan Braun | | Round 5, Pick 20 - Boston Red Sox: MR Sendy Rleal | | Round 5, Pick 21 - Pittsburgh Pirates: MR Ben Kozlowski | | Round 5, Pick 22 - San Francisco Giants: MR Pat Strange | | Round 5, Pick 23 - Minnesota Twins: MR Sean Tracey | | Round 5, Pick 24 - Philadelphia Phillies: MR Jose Diaz | | Round 5, Pick 25 - Seattle Mariners: MR Chad Bentz | | Round 5, Pick 26 - Cincinnati Reds: MR Shane Komine | | Round 5, Pick 27 - Milwaukee Brewers: 3B Brooks Conrad | | Round 5, Pick 28 - Texas Rangers: C Kevin Richardson | | Round 5, Pick 29 - Houston Astros: C Ryan Hanigan | | Round 5, Pick 30 - Los Angeles Dodgers: C J.d. Closser |
| Round 6 | | Round 6, Pick 1 - Detroit Tigers: LF Sean Barker | | Round 6, Pick 2 - Baltimore Orioles: CF Reggie Abercrombie | | Round 6, Pick 3 - Montreal Expos: 3B Luis Rodriguez | | Round 6, Pick 4 - San Diego Padres: 2B Danny Garcia | | Round 6, Pick 5 - Arizona Diamondbacks: C Mike Rabelo | | Round 6, Pick 6 - Chicago Cubs: LF T.j. Bohn | | Round 6, Pick 7 - Colorado Rockies: 3B Drew Henson | | Round 6, Pick 8 - Florida Marlins: C Shawn Riggans | | Round 6, Pick 9 - Oakland Athletics: 1B Craig Brazell | | Round 6, Pick 10 - New York Mets: CF Ramon Nivar | | Round 6, Pick 11 - Chicago White Sox: LF Reid Gorecki | | Round 6, Pick 12 - Tampa Bay Devil Rays: CF Eric Reed | | Round 6, Pick 13 - St. Louis Cardinals: C Luke Carlin | | Round 6, Pick 14 - Toronto Blue Jays: LF B.J. Garbe | | Round 6, Pick 15 - Kansas City Royals: C Justin Knoedler | | Round 6, Pick 16 - Anaheim Angels: LF Byron Gettis | | Round 6, Pick 17 - Atlanta Braves: LF Jason Perry | | Round 6, Pick 18 - New York Yankees: 1B Mark Kiger |
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